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Lara Schneider

Employment: 
Researcher
Personal: 

My name is Lara and I am a researcher at the chair of Prof. Dr. Hans-Peter Lenhof. I mainly work in the area of decision support systems for cancer treatment. Two of my projects in this area are DrugTargetInspector and ClinOmicsTrail.











Education: 
  • Master of Science: Computational Molecular Biology, Saarland University, October 2012
  • Bachelor of Science: Computational Molecular Biology, Saarland University, May 2011
Research: 
  • Personalized medicine
  • Cancer research
  • Multi-omics integrative analyses
  • Treatment decision-making assistance tools
Teaching: 
Teaching Assistant:
  • Bioinformatics I: WS12/13, WS13/14, WS15/16, WS16/17, WS17/18
  • Bioinformatics II: SS13, SS14, SS15, SS16, SS17, SS18
  • Proseminar 'Bioinformatic Approaches for Regulatory Genomics': SS18
  • Proseminar 'Bioinformatic Approaches for Personalized Cancer Treatment': WS15/16, SS16, WS16/17, SS17, WS17/18, SS18
  • Proseminar 'Pathway and Network Analysis in Cancer Research': WS16/17, SS17, WS17/18
  • Proseminar 'Bioinformatic Approaches for Cancer Research': WS12/13, SS13, WS13/14, SS14, WS4/15, SS15
  • Seminar 'Computational Systems Biology of Cancer': WS16/17, SS17, WS17/18, SS18
  • Seminar 'Probabilistic Graphical Models in Disease': WS15/16, SS16
  • Seminar 'Inferring Network Structure from Data': SS13, WS13/14, SS14, WS14/15, SS15
  • Seminar 'Modeling and Analyzing Biological Networks': WS12/13

Tutor:

  • Preparatory Course on Mathematics for Computer Scientists: 2008, 2009
  • Programming I: WS08/09
  • Programming II: SS09
  • Bioinformatics I: WS09/10, WS10/11

My Publications

2019

[SKT+19] Schneider, L., Kehl, T., Thedinga, K., Grammes, N. L., Backes, C., Mohr, C., Schubert, B., Lenhof, K., Gerstner, N., Hartkopf. A. D., Wallwiener, M., Kohlbacher, O., Keller, A., Meese, E., Graf, N., Lenhof, H.-P. ClinOmicsTrail bc: a visual analytics tool for breast cancer treatment stratification, Bioinformatics, btz302, 2019. DOI: 10.1093/bioinformatics/btz302.
[KSK+19] Kehl, T., Schneider, L., Kattler, K., Stöckel, D., Wegert, J., Gerstner, N., Ludwig, N., Distler, U., Tenzer, S., Gessler, M., Walter, J., Keller, A., Graf, N., Meese, E., Lenhof, H.-P. The role of TCF3 as potential master regulator in blastemal Wilms tumors. International journal of cancer 144 (6), 1432-1443, 2019. DOI: 10.1002/ijc.31834.

2018

[KSK+18] Kehl, T., Schneider, L., Kattler, K., Stöckel, D., Wegert, J., Gerstner, N., Ludwig, N., Distler, U., Schick, M., Keller, U., Tenzer, S., Gessler, M., Walter, J., Keller, A., Graf, N., Meese, E., Lenhof, H.-P. REGGAE: a novel approach for the identification of key transcriptional regulators. Bioinformatics. Bioinformatics 34 (20), 3503-3510, 2018. DOI: 10.1093/bioinformatics/bty372.

2017

[KSS+17] Kehl, T., Schneider, L., Schmidt, F., Stöckel, D., Gerstne,r N., Backes, C., Meese, E., Keller, A., Schulz, M.H., Lenhof, H.-P. RegulatorTrail: a web service for the identification of key transcriptional regulators. Nucleic acids research 45 (W1), W146-W153, 2017. DOI: 10.1093/nar/gkx350.
[BKS+17] Backes C., Kehl T., Stöckel D., Fehlmann T., Schneider L., Meese E., Lenhof H.-P., Keller A. miRPathDB: a new dictionary on microRNAs and target pathways. Nucleic Acids Res. 2017 Jan 4;45(D1):D90-D96. doi: 10.1093/nar/gkw926

2016

[SSK+16] Schneider, L., Stöckel, D., Kehl, T., Gerasch, A., Ludwig, N., Leidinger, P., Huwer, H., Tenzer, S., Kohlbacher, O., Hildebrandt, A., Kaufmann, M., Gessler, M., Keller, A., Meese, E., Graf, N., and Lenhof, H.-P.: DrugTargetInspector: An assistance tool for patient treatment stratification. Int J Cancer. 2016 Apr 1;138(7):1765-76. doi: 10.1002/ijc.29897.
[SKT+16] Stöckel, D., Kehl, T., Trampert, P., Schneider, L., Backes, C., Ludwig, N., Gerasch, A., Kaufmann, M., Gessler, M., Graf, N., Meese, E., Keller, A., Lenhof, H.P.,: Multi-omics Enrichment Analysis using the GeneTrail2 Web Service. Bioinformatics 2016; doi: 10.1093/bioinformatics/btv770

Contact

Address:
Center for Bioinformatics
Saarland Informatics Campus
Saarland University
Building E 2.1
Room 403
P.O. Box 15 11 50
66041 Saarbrücken, Germany
Email:
lschneider@bioinf.uni-sb.de
Fax:
+49-681-302-64719
Phone:
+49-681-302-68614